Prexasertib HCl
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Hodoodo CAT#: H206989

CAS#: 1234015-54-3 (2HCl)

Description: Prexasertib, also know LY2606368, is a small molecule checkpoint kinase inhibitor that causes DNA double-strand breaks, which results in apoptosis. Prexasertib is mainly active against CHEK1, with minor activity against CHEK2. Preclinical studies have shown that prexasertib induces DNA damage and tumor cell apoptosis in monotherapy. Prexasertib may also potentiate the cytotoxicity of DNA-damaging agents and reverse tumor cell resistance to chemotherapeutic agents.


Chemical Structure

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Prexasertib HCl
CAS# 1234015-54-3 (2HCl)

Theoretical Analysis

Hodoodo Cat#: H206989
Name: Prexasertib HCl
CAS#: 1234015-54-3 (2HCl)
Chemical Formula: C18H21Cl2N7O2
Exact Mass: 0.00
Molecular Weight: 438.310
Elemental Analysis: C, 49.33; H, 4.83; Cl, 16.18; N, 22.37; O, 7.30

Price and Availability

Size Price Availability Quantity
10mg USD 150 Ready to ship
25mg USD 250 Ready to ship
50mg USD 450 Ready to ship
100mg USD 750 Ready to ship
200mg USD 1350 Ready to Ship
500mg USD 2850 Ready to Ship
1g USD 4350 Ready to Ship
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Related CAS #: 1234015-54-3 (2HCl)   1234015-55-4 (mesylate)   1234015-58-7 (2 mesylate)   1234015-52-1 (free base)   1234015-57-6 (mesylate hydrate)   2100300-72-7 (lactate hydrate)   2781996-46-9 (lactate)    

Synonym: Prexasertib HCl; Prexasertib dihydrochloride; LY2606368 HCl; LY-2606368 HCl; LY 2606368 HCl;

IUPAC/Chemical Name: 5-((5-(2-(3-aminopropoxy)-6-methoxyphenyl)-1H-pyrazol-3-yl)amino)pyrazine-2-carbonitrile dihydrochloride

InChi Key: KMEIPKXRCJTZBZ-UHFFFAOYSA-N

InChi Code: InChI=1S/C18H19N7O2.2ClH/c1-26-14-4-2-5-15(27-7-3-6-19)18(14)13-8-16(25-24-13)23-17-11-21-12(9-20)10-22-17;;/h2,4-5,8,10-11H,3,6-7,19H2,1H3,(H2,22,23,24,25);2*1H

SMILES Code: N#CC1=NC=C(NC2=NNC(C3=C(OC)C=CC=C3OCCCN)=C2)N=C1.[H]Cl.[H]Cl

Appearance: Solid powder

Purity: >98% (or refer to the Certificate of Analysis)

Shipping Condition: Shipped under ambient temperature as non-hazardous chemical. This product is stable enough for a few weeks during ordinary shipping and time spent in Customs.

Storage Condition: Dry, dark and at 0 - 4 C for short term (days to weeks) or -20 C for long term (months to years).

Solubility: Soluble in DMSO

Shelf Life: >3 years if stored properly

Drug Formulation: This drug may be formulated in DMSO

Stock Solution Storage: 0 - 4 C for short term (days to weeks), or -20 C for long term (months).

HS Tariff Code: 2934.99.9001

More Info:

Biological target: Prexasertib dihydrochloride (LY2606368 dihydrochloride) is an ATP-competitive second-generation checkpoint kinase 1 (CHK1) inhibitor with a Ki of 0.9 nM and an IC50 of
In vitro activity: Five pediatric cancer cell lines representing different childhood sarcomas – A673 (Ewing’s sarcoma); MG-63 (osteosarcoma); RD (embryonal rhabdomyosarcoma [eRMS]); and Rh41 and SJCRH30 (alveolar RMS [aRMS]) – were analyzed for changes in cell signaling following in vitro treatment with prexasertib. Reduction in CHK1 autophosphorylation at S296 indicated that kinase activity was diminished following 24h of treatment in all cell lines evaluated (Fig. 1A). Interestingly, WEE1, a downstream effector of CHK1 and a key modulator of the G2-M checkpoint following DNA damage, was readily detected by immunoblot in SJCRH30 and Rh41 but not in the other 3 cell lines evaluated; decreased phosphorylation of WEE1 in both aRMS cell lines further demonstrated prexasertib-mediated CHK1 inhibition (Fig. 1A). Furthermore, CDK1, CDK2, and CDC25A/C protein levels were relatively unchanged following prexasertib treatment in all cell lines evaluated with the exception of SJCRH30, in which an increase in both CDK2 and CDC25A total protein was noted (Supplementary Fig. S2). Reference: Clin Cancer Res. 2019 Apr 1; 25(7): 2278–2289. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6445779/
In vivo activity: In this work, plasma, tumor and brain ECF disposition of prexasertib were described in mice bearing G3MB and NTB mice receiving a single dose of prexasertib (10 mg/kq, SQ) using cerebral microdialysis and pharmacokinetic modeling. The CNS penetration of prexasertib in tumor-bearing mice was characterized by a mean Kp,uu = 0.17, and was statistically greater than that observed in NTB mice (Kp.uu = 0.09, p-value = 0.04). Pharmacodynamic studies were further performed in tumor-bearing mice to characterize the dynamics of markers of prexasertib efficacy. The increases of nuclear pCHK1 S345 and pH2Ax levels in tumor tissues after a single dose of prexasertib (20 mg/kg, IV) confirmed a treatment-induced target engagement, and thus, an adequate CNS penetration of the CHK1 inhibitor. These results support further preclinical and clinical investigation in treating adult and pediatric CNS malignancies. Reference: Eur J Pharm Sci. 2020 Jan 15; 142: 105106. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6925336/

Solubility Data

Solvent Max Conc. mg/mL Max Conc. mM
Solubility
DMSO 12.5 28.52

Preparing Stock Solutions

The following data is based on the product molecular weight 438.31 Batch specific molecular weights may vary from batch to batch due to the degree of hydration, which will affect the solvent volumes required to prepare stock solutions.

Recalculate based on batch purity %
Concentration / Solvent Volume / Mass 1 mg 5 mg 10 mg
1 mM 1.15 mL 5.76 mL 11.51 mL
5 mM 0.23 mL 1.15 mL 2.3 mL
10 mM 0.12 mL 0.58 mL 1.15 mL
50 mM 0.02 mL 0.12 mL 0.23 mL
Formulation protocol: 1. Branigan TB, Kozono D, Schade AE, Deraska P, Rivas HG, Sambel L, Reavis HD, Shapiro GI, D'Andrea AD, DeCaprio JA. MMB-FOXM1-driven premature mitosis is required for CHK1 inhibitor sensitivity. Cell Rep. 2021 Mar 2;34(9):108808. doi: 10.1016/j.celrep.2021.108808. PMID: 33657372; PMCID: PMC7970065. 2. Lowery CD, Dowless M, Renschler M, Blosser W, VanWye AB, Stephens JR, Iversen PW, Lin AB, Beckmann RP, Krytska K, Cole KA, Maris JM, Hawkins DS, Rubin BP, Kurmasheva RT, Houghton PJ, Gorlick R, Kolb EA, Kang MH, Reynolds CP, Erickson SW, Teicher BA, Smith MA, Stancato LF. Broad Spectrum Activity of the Checkpoint Kinase 1 Inhibitor Prexasertib as a Single Agent or Chemopotentiator Across a Range of Preclinical Pediatric Tumor Models. Clin Cancer Res. 2019 Apr 1;25(7):2278-2289. doi: 10.1158/1078-0432.CCR-18-2728. Epub 2018 Dec 18. PMID: 30563935; PMCID: PMC6445779. 3. Campagne O, Davis A, Maharaj AR, Zhong B, Stripay J, Farmer D, Roussel MF, Stewart CF. CNS penetration and pharmacodynamics of the CHK1 inhibitor prexasertib in a mouse Group 3 medulloblastoma model. Eur J Pharm Sci. 2020 Jan 15;142:105106. doi: 10.1016/j.ejps.2019.105106. Epub 2019 Oct 25. PMID: 31669383; PMCID: PMC6925336. 4. King C, Diaz HB, McNeely S, Barnard D, Dempsey J, Blosser W, Beckmann R, Barda D, Marshall MS. LY2606368 Causes Replication Catastrophe and Antitumor Effects through CHK1-Dependent Mechanisms. Mol Cancer Ther. 2015 Sep;14(9):2004-13. doi: 10.1158/1535-7163.MCT-14-1037. Epub 2015 Jul 3. PMID: 26141948.
In vitro protocol: 1. Branigan TB, Kozono D, Schade AE, Deraska P, Rivas HG, Sambel L, Reavis HD, Shapiro GI, D'Andrea AD, DeCaprio JA. MMB-FOXM1-driven premature mitosis is required for CHK1 inhibitor sensitivity. Cell Rep. 2021 Mar 2;34(9):108808. doi: 10.1016/j.celrep.2021.108808. PMID: 33657372; PMCID: PMC7970065. 2. Lowery CD, Dowless M, Renschler M, Blosser W, VanWye AB, Stephens JR, Iversen PW, Lin AB, Beckmann RP, Krytska K, Cole KA, Maris JM, Hawkins DS, Rubin BP, Kurmasheva RT, Houghton PJ, Gorlick R, Kolb EA, Kang MH, Reynolds CP, Erickson SW, Teicher BA, Smith MA, Stancato LF. Broad Spectrum Activity of the Checkpoint Kinase 1 Inhibitor Prexasertib as a Single Agent or Chemopotentiator Across a Range of Preclinical Pediatric Tumor Models. Clin Cancer Res. 2019 Apr 1;25(7):2278-2289. doi: 10.1158/1078-0432.CCR-18-2728. Epub 2018 Dec 18. PMID: 30563935; PMCID: PMC6445779.
In vivo protocol: 1. Campagne O, Davis A, Maharaj AR, Zhong B, Stripay J, Farmer D, Roussel MF, Stewart CF. CNS penetration and pharmacodynamics of the CHK1 inhibitor prexasertib in a mouse Group 3 medulloblastoma model. Eur J Pharm Sci. 2020 Jan 15;142:105106. doi: 10.1016/j.ejps.2019.105106. Epub 2019 Oct 25. PMID: 31669383; PMCID: PMC6925336. 2. King C, Diaz HB, McNeely S, Barnard D, Dempsey J, Blosser W, Beckmann R, Barda D, Marshall MS. LY2606368 Causes Replication Catastrophe and Antitumor Effects through CHK1-Dependent Mechanisms. Mol Cancer Ther. 2015 Sep;14(9):2004-13. doi: 10.1158/1535-7163.MCT-14-1037. Epub 2015 Jul 3. PMID: 26141948.

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1: Giudice E, Huang TT, Nair JR, Zurcher G, McCoy A, Nousome D, Radke MR, Swisher EM, Lipkowitz S, Ibanez K, Donohue D, Malys T, Lee MJ, Redd B, Levy E, Rastogi S, Sato N, Trepel JB, Lee JM. The CHK1 inhibitor prexasertib in BRCA wild-type platinum-resistant recurrent high-grade serous ovarian carcinoma: a phase 2 trial. Nat Commun. 2024 Mar 30;15(1):2805. doi: 10.1038/s41467-024-47215-6. PMID: 38555285; PMCID: PMC10981752.


2: Konstantinopoulos PA, Lee JM, Gao B, Miller R, Lee JY, Colombo N, Vergote I, Credille KM, Young SR, McNeely S, Wang XA, Lin AB, Shapira-Frommer R. A Phase 2 study of prexasertib (LY2606368) in platinum resistant or refractory recurrent ovarian cancer. Gynecol Oncol. 2022 Nov;167(2):213-225. doi: 10.1016/j.ygyno.2022.09.019. Epub 2022 Sep 30. PMID: 36192237; PMCID: PMC10673677.


3: Moore KN, Hong DS, Patel MR, Pant S, Ulahannan SV, Jones S, Meric-Bernstam F, Wang JS, Aljumaily R, Hamilton EP, Wittchen ES, Wang X, Lin AB, Bendell JC. A Phase 1b Trial of Prexasertib in Combination with Standard-of-Care Agents in Advanced or Metastatic Cancer. Target Oncol. 2021 Sep;16(5):569-589. doi: 10.1007/s11523-021-00835-0. Epub 2021 Sep 24. PMID: 34559360.


4: Do KT, Kochupurakkal B, Kelland S, de Jonge A, Hedglin J, Powers A, Quinn N, Gannon C, Vuong L, Parmar K, Lazaro JB, D'Andrea AD, Shapiro GI. Phase 1 Combination Study of the CHK1 Inhibitor Prexasertib and the PARP Inhibitor Olaparib in High-grade Serous Ovarian Cancer and Other Solid Tumors. Clin Cancer Res. 2021 Sep 1;27(17):4710-4716. doi: 10.1158/1078-0432.CCR-21-1279. Epub 2021 Jun 15. PMID: 34131002.


5: Ostergaard J, Jonart LM, Ebadi M, Koppenhafer SL, Gordon DJ, Gordon PM. Preclinical efficacy of prexasertib in acute lymphoblastic leukemia. Br J Haematol. 2021 Sep;194(6):1094-1098. doi: 10.1111/bjh.17610. Epub 2021 Jun 7. PMID: 34096630; PMCID: PMC8504167.


6: Byers LA, Navarro A, Schaefer E, Johnson M, Özgüroğlu M, Han JY, Bondarenko I, Cicin I, Dragnev KH, Abel A, Wang X, McNeely S, Hynes S, Lin AB, Forster M. A Phase II Trial of Prexasertib (LY2606368) in Patients With Extensive-Stage Small-Cell Lung Cancer. Clin Lung Cancer. 2021 Nov;22(6):531-540. doi: 10.1016/j.cllc.2021.04.005. Epub 2021 Apr 24. PMID: 34034991.


7: Cash T, Fox E, Liu X, Minard CG, Reid JM, Scheck AC, Weigel BJ, Wetmore C. A phase 1 study of prexasertib (LY2606368), a CHK1/2 inhibitor, in pediatric patients with recurrent or refractory solid tumors, including CNS tumors: A report from the Children's Oncology Group Pediatric Early Phase Clinical Trials Network (ADVL1515). Pediatr Blood Cancer. 2021 Sep;68(9):e29065. doi: 10.1002/pbc.29065. Epub 2021 Apr 21. PMID: 33881209; PMCID: PMC9090141.


8: Liu C, Xie J, Wu W, Wang M, Chen W, Idres SB, Rong J, Deng LW, Khan SA, Wu J. Automated synthesis of prexasertib and derivatives enabled by continuous-flow solid-phase synthesis. Nat Chem. 2021 May;13(5):451-457. doi: 10.1038/s41557-021-00662-w. Epub 2021 Apr 19. PMID: 33875818; PMCID: PMC8054510.


9: Do KT, Manuszak C, Thrash E, Giobbie-Hurder A, Hu J, Kelland S, Powers A, de Jonge A, Shapiro GI, Severgnini M. Immune modulating activity of the CHK1 inhibitor prexasertib and anti-PD-L1 antibody LY3300054 in patients with high- grade serous ovarian cancer and other solid tumors. Cancer Immunol Immunother. 2021 Oct;70(10):2991-3000. doi: 10.1007/s00262-021-02910-x. Epub 2021 Mar 20. PMID: 33745032.


10: Yang ES, Deutsch E, Mehmet A, Fayette J, Tao Y, Nabell L, Spencer SA, Wang XA, Spoljoric EA, Zhang W, Hynes SM, Decker RL, Lin AKB, William WN Jr. A Phase 1b trial of prexasertib in combination with chemoradiation in patients with locally advanced head and neck squamous cell carcinoma. Radiother Oncol. 2021 Apr;157:203-209. doi: 10.1016/j.radonc.2021.01.032. Epub 2021 Feb 9. PMID: 33577866.


11: Hong DS, Moore KN, Bendell JC, Karp DD, Wang JS, Ulahannan SV, Jones S, Wu W, Donoho GP, Ding Y, Capen A, Wang X, Bence Lin A, Patel MR. Preclinical Evaluation and Phase Ib Study of Prexasertib, a CHK1 Inhibitor, and Samotolisib (LY3023414), a Dual PI3K/mTOR Inhibitor. Clin Cancer Res. 2021 Apr 1;27(7):1864-1874. doi: 10.1158/1078-0432.CCR-20-3242. Epub 2021 Jan 25. PMID: 33495309.


12: Chaudhary R, Slebos RJC, Song F, McCleary-Sharpe KP, Masannat J, Tan AC, Wang X, Amaladas N, Wu W, Hall GE, Conejo-Garcia JR, Hernandez-Prera JC, Chung CH. Effects of checkpoint kinase 1 inhibition by prexasertib on the tumor immune microenvironment of head and neck squamous cell carcinoma. Mol Carcinog. 2021 Feb;60(2):138-150. doi: 10.1002/mc.23275. Epub 2020 Dec 30. PMID: 33378592; PMCID: PMC7856233.


13: Lee KJ, Wright G, Bryant H, Wiggins LA, Schuler M, Gassman NR. EGFR signaling promotes resistance to CHK1 inhibitor prexasertib in triple negative breast cancer. Cancer Drug Resist. 2020 Dec 5;3(4):980-991. doi: 10.20517/cdr.2020.73. PMID: 35582228; PMCID: PMC8992551.


14: Lampert EJ, Cimino-Mathews A, Lee JS, Nair J, Lee MJ, Yuno A, An D, Trepel JB, Ruppin E, Lee JM. Clinical outcomes of prexasertib monotherapy in recurrent BRCA wild-type high-grade serous ovarian cancer involve innate and adaptive immune responses. J Immunother Cancer. 2020 Jul;8(2):e000516. doi: 10.1136/jitc-2019-000516. PMID: 32709712; PMCID: PMC7380948.


15: Nair J, Huang TT, Murai J, Haynes B, Steeg PS, Pommier Y, Lee JM. Resistance to the CHK1 inhibitor prexasertib involves functionally distinct CHK1 activities in BRCA wild-type ovarian cancer. Oncogene. 2020 Aug;39(33):5520-5535. doi: 10.1038/s41388-020-1383-4. Epub 2020 Jul 9. PMID: 32647134; PMCID: PMC7426265.


16: Morimoto Y, Takada K, Takeuchi O, Watanabe K, Hirohara M, Hamamoto T, Masuda Y. Bcl-2/Bcl-xL inhibitor navitoclax increases the antitumor effect of Chk1 inhibitor prexasertib by inducing apoptosis in pancreatic cancer cells via inhibition of Bcl-xL but not Bcl-2. Mol Cell Biochem. 2020 Sep;472(1-2):187-198. doi: 10.1007/s11010-020-03796-6. Epub 2020 Jun 21. PMID: 32567031.


17: Evangelisti G, Barra F, Moioli M, Sala P, Stigliani S, Gustavino C, Costantini S, Ferrero S. Prexasertib: an investigational checkpoint kinase inhibitor for the treatment of high-grade serous ovarian cancer. Expert Opin Investig Drugs. 2020 Aug;29(8):779-792. doi: 10.1080/13543784.2020.1783238. Epub 2020 Jun 25. PMID: 32539469.


18: Gatti-Mays ME, Karzai FH, Soltani SN, Zimmer A, Green JE, Lee MJ, Trepel JB, Yuno A, Lipkowitz S, Nair J, McCoy A, Lee JM. A Phase II Single Arm Pilot Study of the CHK1 Inhibitor Prexasertib (LY2606368) in BRCA Wild-Type, Advanced Triple-Negative Breast Cancer. Oncologist. 2020 Dec;25(12):1013-e1824. doi: 10.1634/theoncologist.2020-0491. Epub 2020 Jun 24. PMID: 32510664; PMCID: PMC7938394.


19: Zeng L, Nikolaev A, Xing C, Della Manna DL, Yang ES. CHK1/2 Inhibitor Prexasertib Suppresses NOTCH Signaling and Enhances Cytotoxicity of Cisplatin and Radiation in Head and Neck Squamous Cell Carcinoma. Mol Cancer Ther. 2020 Jun;19(6):1279-1288. doi: 10.1158/1535-7163.MCT-19-0946. Epub 2020 May 5. PMID: 32371584.


20: Blosser WD, Dempsey JA, McNulty AM, Rao X, Ebert PJ, Lowery CD, Iversen PW, Webster YW, Donoho GP, Gong X, Merzoug FF, Buchanan S, Boehnke K, Yu C, You XT, Beckmann RP, Wu W, McNeely SC, Lin AB, Martinez R. A pan-cancer transcriptome analysis identifies replication fork and innate immunity genes as modifiers of response to the CHK1 inhibitor prexasertib. Oncotarget. 2020 Jan 21;11(3):216-236. doi: 10.18632/oncotarget.27400. PMID: 32076484; PMCID: PMC6980627.

Wu WH, Bonnet S, Shimauchi T, Toro V, Grobs Y, Romanet C, Bourgeois A, Vitry G, Omura J, Tremblay E, Nadeau V, Orcholski M, Breuils-Bonnet S, Martineau S, Ferraro P, Potus F, Paulin R, Provencher S, Boucherat O. Potential for inhibition of checkpoint kinases 1/2 in pulmonary fibrosis and secondary pulmonary hypertension. Thorax. 2021 Jul 5:thoraxjnl-2021-217377. doi: 10.1136/thoraxjnl-2021-217377. Epub ahead of print. PMID: 34226205.